PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022951048.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 188aa MW: 19884.9 Da PI: 7.9458 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.8 | 1.9e-05 | 22 | 44 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ Cg F++ L+ H+r+H XP_022951048.1 22 FKCGFCGSEFRSEKALHGHMRSH 44 89********************9 PP | |||||||
2 | zf-C2H2 | 13.9 | 0.00016 | 137 | 159 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C Cgk F ++ L H +++ XP_022951048.1 137 YPCDFCGKAFASPQALGGHKSSC 159 99*************99998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MGKRKAADGD GDCDGSDRKN RFKCGFCGSE FRSEKALHGH MRSHPERNWR GMNPPVSAAA 60 AAAAAVAATG SFSSSSSSGG VDHEVRDRDC YSPLLTWSTT ACRGRRPIGS SSSASSGVVD 120 ATDTGKENTD ALLRNEYPCD FCGKAFASPQ ALGGHKSSCP CKPRKNGPQE AKLLRFDLNE 180 LPPEDGEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35280.1 | 1e-09 | C2H2 family protein |