PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022950795.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 490aa MW: 51931.6 Da PI: 8.8167

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022950795.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.4e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022950795.1 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	11.3	0.0011	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022950795.1 137 WKCDKCSKKYAVQSDWKAHSKIC 159 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MPADLDNSSS ASGEPTESSP GNVAPTPKPA AKKKRNLPGM PDPDAEVIAL SPKTLLATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRTSKEVKKK VYVCPESSCV HHDPSRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFIT 180 HRAFCDALAE ENAKAQPQSL VDKPVSDSQK AVESSPKPSP PPEPSPPPST CVLSPVLPIQ 240 SENQPEEAPM ATTGMSSSCS SSSSKSSSSN NSSSSQFASL FASTTTSMSL QPPRPPTFTD 300 LIHTMACSDR LTDYAPTTTI EPISLCLSTS HGASVFGAAS QELRQYTPSP QPAMSATALL 360 QKAAQMGAAA SNASLLRGLG LGLVPSSTTS AAPQERLPWN QQRQIEADGI SISAGLGLGL 420 PCDGNSGLKE LMRSSNHSIF APKHTTLDFL GLGMAAAGGS PNSSLAALIG GSMGSYGGGA 480 KSSKDMNTNN

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MPADLDNSSS ASGEPTESSP GNVAPTPKPA AKKKRNLPGM PDPDAEVIAL SPKTLLATNR  60
FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRTSKEVKKK VYVCPESSCV HHDPSRALGD  120
LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFIT  180
HRAFCDALAE ENAKAQPQSL VDKPVSDSQK AVESSPKPSP PPEPSPPPST CVLSPVLPIQ  240
SENQPEEAPM ATTGMSSSCS SSSSKSSSSN NSSSSQFASL FASTTTSMSL QPPRPPTFTD  300
LIHTMACSDR LTDYAPTTTI EPISLCLSTS HGASVFGAAS QELRQYTPSP QPAMSATALL  360
QKAAQMGAAA SNASLLRGLG LGLVPSSTTS AAPQERLPWN QQRQIEADGI SISAGLGLGL  420
PCDGNSGLKE LMRSSNHSIF APKHTTLDFL GLGMAAAGGS PNSSLAALIG GSMGSYGGGA  480
KSSKDMNTNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-107	C2H2 family protein