PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022950794.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 491aa MW: 52059.7 Da PI: 8.8167 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.2 | 1.4e-05 | 61 | 83 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022950794.1 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP | |||||||
2 | zf-C2H2 | 11.3 | 0.0011 | 137 | 159 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022950794.1 137 WKCDKCSKKYAVQSDWKAHSKIC 159 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence |
MPADLDNSSS ASGEPTESSP GNVAPTPKPA AKKKRNLPGM PDPDAEVIAL SPKTLLATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRTSKEVKKK VYVCPESSCV HHDPSRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFIT 180 HRAFCDALAE ENAKAQPQSL VDKPVSDSQK AVESSPKPSP PPEPSPPPST CVLSPVLPIQ 240 SQENQPEEAP MATTGMSSSC SSSSSKSSSS NNSSSSQFAS LFASTTTSMS LQPPRPPTFT 300 DLIHTMACSD RLTDYAPTTT IEPISLCLST SHGASVFGAA SQELRQYTPS PQPAMSATAL 360 LQKAAQMGAA ASNASLLRGL GLGLVPSSTT SAAPQERLPW NQQRQIEADG ISISAGLGLG 420 LPCDGNSGLK ELMRSSNHSI FAPKHTTLDF LGLGMAAAGG SPNSSLAALI GGSMGSYGGG 480 AKSSKDMNTN N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 1e-107 | C2H2 family protein |