PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022950517.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 25741.4 Da PI: 8.6317 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.5 | 3.5e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRr g++KKA+ELSvLCda+va+i+fs tgkl+e+ss XP_022950517.1 10 KIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIVFSATGKLFEFSS 59 69**********************************************96 PP | |||||||
2 | K-box | 53.3 | 1.2e-18 | 91 | 170 | 18 | 97 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + ++++L+kei + r++R++ Ge+L++L+++eLqqLe+ Le +l+++ +kK e ++++i++lq+k el een++L++ XP_022950517.1 91 NSNYTRLNKEIAEKTRQLRQMRGEELQTLNIEELQQLEKSLECGLSRVMEKKGERIMTEISDLQRKSAELMEENRRLKQA 170 56799************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MAKERIQIRK IDNATARQVT FSKRRRGLFK KAKELSVLCD ADVALIVFSA TGKLFEFSSS 60 SMKGIIERHN LHSKNLQKLE QPSLELQLVE NSNYTRLNKE IAEKTRQLRQ MRGEELQTLN 120 IEELQQLEKS LECGLSRVME KKGERIMTEI SDLQRKSAEL MEENRRLKQA QKMNCVRNLG 180 VEPENLVVED GQSSNSVTEA CVSNSNGPPQ DLDSSDTSLK LGLPYSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-108 | MIKC_MADS family protein |