PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950352.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WOX
Protein Properties Length: 288aa    MW: 32570.6 Da    PI: 6.1053
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950352.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.4e-202586257
                    T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++R+t+t++q+++L+el+++   r psa+++++++++l    +++ ++V++WFqN++a+e++
  XP_022950352.1 25 STRWTPTTDQIRILKELYYNngVRSPSADQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 86
                    58****************98678*************************************97 PP
2Wus_type_Homeobox114.55.3e-372488265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++tRWtPt++Qi+iL+ely+ +G+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
     XP_022950352.1 24 SSTRWTPTTDQIRILKELYYnNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 88
                       789***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEPKQGNEEG SNGRGQGGFL CRQSSTRWTP TTDQIRILKE LYYNNGVRSP SADQIQRISA  60
RLRQYGKIEG KNVFYWFQNH KARERQKKRF TSGSDHHFSK QQQQHPSLIP STLWKPQDSS  120
SSFHNRYRPS NEYVSIAPSS PVMVAVGHMG NYGYGSSTFD NSFRECSILS GGSSSVVGSR  180
SHNMGSWMGV DRRSSPATDI FEKTKYVEEY MEDEEEEEEE QEIETLPLFP IHGGDRNLSG  240
FCSMRQEYSD SFYTTTWYGS SDDGAAGSRT SLELSLNSYA TISPDDGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-41WOX family protein