PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022950337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 306aa MW: 34670.4 Da PI: 6.6299 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 180.8 | 3.6e-56 | 11 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee+v++yL++k+++ +++ +i e+d++k+ePwdLp+k+k +ekewyfF++rd+ky+tg r+nrat++gyWkatgkd+e+l+ XP_022950337.1 11 LPPGFRFHPTDEEIVTYYLTHKITDAAFTA-IAIGEADLNKCEPWDLPHKAKMGEKEWYFFCQRDRKYPTGMRTNRATQTGYWKATGKDREILKG 104 79*************************999.88***************99999*****************************************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ l g+kktLvfykgrap+gekt+Wvmhe+rle XP_022950337.1 105 RTVLAGMKKTLVFYKGRAPRGEKTNWVMHEFRLE 138 9999***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MEEPPPTALD LPPGFRFHPT DEEIVTYYLT HKITDAAFTA IAIGEADLNK CEPWDLPHKA 60 KMGEKEWYFF CQRDRKYPTG MRTNRATQTG YWKATGKDRE ILKGRTVLAG MKKTLVFYKG 120 RAPRGEKTNW VMHEFRLEPK FFQFLGFPKP IKADWVVCRV FHKNITTSVG VVKKIQTSDF 180 SSSLPPLIDP VAARTPISGG FNGGEVNWRL SGPFDNYTND YHYHQPFSAT STATTMISSY 240 PPSVPDDEFF SFDQLGIGGT MPMTTTTTTI AMECKMEQVS WSTMSGVTPE ISSSIDNEAT 300 LEFWDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 2e-93 | NAC family protein |