PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022949871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 583aa MW: 67061.3 Da PI: 6.1478 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.6 | 3.2e-21 | 68 | 159 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g ++kr+fvC+++g++ +kk +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_022949871.1 68 EYYGNFARRNGFSIRKERSRLSPQLG-VYKRDFVCYRSGFAPAKKKPIGENHRDRKSVRCGCDAKMYLSKEVsegVAQWFVVQFSNVHNHELL 159 59********************8888.********************9**********************98766789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 583 aa Download sequence |
MASIPSKNVW IRRQQCPCGD WKCYVSCEGE GEETSVAAEL VKSERVSSEA MVSPYVGMVF 60 KNDTDAFEYY GNFARRNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAK KKPIGENHRD 120 RKSVRCGCDA KMYLSKEVSE GVAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQEH DALLNEKREI 240 DTIELLEACK ATKESDEEFV YDFTVDANDK VEHVAWSYGD SVNAYDMFGD VVYFDTTYSS 300 ITYGLLLGVW LGIDNHGRTI FFGCVLLQDE TPRSLAWAFQ TFIRFMRGTL PQTILTDLDP 360 GLRDAIRSEL PGTKHVISRW NILSKVSSWF SLYLGPRYAE FKSEFDLLYS VESSEDFEIR 420 WDQMVSMFGL VSDKHLDLLF SFREYWVPSC IRGCLLAQMA TSAYFKAVDT FLKGVFNAQT 480 CLRSFFEQVG ISANFQSHEH QEMQYLQLKT NIPIEEHARS ILTPFAFNAL QHELVLAMQY 540 AASEMADGSY LIHHFKKMDG ERLVMWIEDS EQIHCSYGGG KAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |