PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022949870.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 692aa MW: 80072 Da PI: 6.1694

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022949870.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.2	4.1e-21	68	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g ++kr+fvC+++g++ +kk +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_022949870.1 68 EYYGNFARRNGFSIRKERSRLSPQLG-VYKRDFVCYRSGFAPAKKKPIGENHRDRKSVRCGCDAKMYLSKEVsegVAQWFVVQFSNVHNHELL 159 59******************8888.****************9******************98766789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MASIPSKNVW IRRQQCPCGD WKCYVSCEGE GEETSVAAEL VKSERVSSEA MVSPYVGMVF 60 KNDTDAFEYY GNFARRNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAK KKPIGENHRD 120 RKSVRCGCDA KMYLSKEVSE GVAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQEH DALLNEKREI 240 DTIELLEACK ATKESDEEFV YDFTVDANDK VEHVAWSYGD SVNAYDMFGD VVYFDTTYSS 300 ITYGLLLGVW LGIDNHGRTI FFGCVLLQDE TPRSLAWAFQ TFIRFMRGTL PQTILTDLDP 360 GLRDAIRSEL PGTKHVISRW NILSKVSSWF SLYLGPRYAE FKSEFDLLYS VESSEDFEIR 420 WDQMVSMFGL VSDKHLDLLF SFREYWVPSC IRGCLLAQMA TSAYFKAVDT FLKGVFNAQT 480 CLRSFFEQVG ISANFQSHEH QEMQYLQLKT NIPIEEHARS ILTPFAFNAL QHELVLAMQY 540 AASEMADGSY LIHHFKKMDG ERLVMWIEDS EQIHCSCKEF ESSGMLCRHA LRIFIIKNYF 600 QLPDKYYLSR WRRESSLALS DGHGIESNDG HWFHEYQRLT ETLFAESSIT KERSEHVHRE 660 LMKEITRLLN EIRRMPESDG VAAMDLTESP NG

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MASIPSKNVW IRRQQCPCGD WKCYVSCEGE GEETSVAAEL VKSERVSSEA MVSPYVGMVF  60
KNDTDAFEYY GNFARRNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAK KKPIGENHRD  120
RKSVRCGCDA KMYLSKEVSE GVAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER  180
ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQEH DALLNEKREI  240
DTIELLEACK ATKESDEEFV YDFTVDANDK VEHVAWSYGD SVNAYDMFGD VVYFDTTYSS  300
ITYGLLLGVW LGIDNHGRTI FFGCVLLQDE TPRSLAWAFQ TFIRFMRGTL PQTILTDLDP  360
GLRDAIRSEL PGTKHVISRW NILSKVSSWF SLYLGPRYAE FKSEFDLLYS VESSEDFEIR  420
WDQMVSMFGL VSDKHLDLLF SFREYWVPSC IRGCLLAQMA TSAYFKAVDT FLKGVFNAQT  480
CLRSFFEQVG ISANFQSHEH QEMQYLQLKT NIPIEEHARS ILTPFAFNAL QHELVLAMQY  540
AASEMADGSY LIHHFKKMDG ERLVMWIEDS EQIHCSCKEF ESSGMLCRHA LRIFIIKNYF  600
QLPDKYYLSR WRRESSLALS DGHGIESNDG HWFHEYQRLT ETLFAESSIT KERSEHVHRE  660
LMKEITRLLN EIRRMPESDG VAAMDLTESP NG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein