PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949810.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 369aa    MW: 41527 Da    PI: 5.377
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949810.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.5e-1872130255
             AP2   2 gykGVrwdkkrgrWvAeIrdpse.ng....kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr++  +g+WvAeIr+p   n+    k+  r +lg+f ta +Aa a+++a+k+++g
  XP_022949810.1  72 NFRGVRQRT-WGKWVAEIREPIAsNNtrvkKKgSRLWLGTFATAHQAAVAYDEAAKAMYG 130
                     69****999.**********7567889*86448************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MTSENSNGEK ISRKRRNGFV SVVDTLNKWK KLNNQLEFLA KDGVEEVRRV PAKGSKKGCM  60
RGKGGPQNSD CNFRGVRQRT WGKWVAEIRE PIASNNTRVK KKGSRLWLGT FATAHQAAVA  120
YDEAAKAMYG PFARLNFPDD SSSLKPVTAE HSDTVSPVAS SSSSSSFLNG VSAEKLNCEY  180
ESMEEPKVKV EETARNGVNY TDANPNSVYD SNNIGNRSTE GDIKDGLADV VRSHDINKYS  240
QDQNDPSELC FKFEAMDTNG YNDINDCNQY LLQKLQSDAY ARRTYWIPAE WEVGGLGPTT  300
KVMEGKGTEM ESYVDCMDFN RDLSLLLDRQ KHMGVGDQRV DDCNFEFLRP DYDFGLEEER  360
KWLDSCFHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.13e-42ERF family protein