PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022948893.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 200aa MW: 21880.5 Da PI: 9.6306 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2e-19 | 23 | 72 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + ++r++lg+f++ae+Aa+a+++a+ l+g XP_022948893.1 23 RYRGVRRRP-WGRFAAEIRDPLK---KTRVWLGTFDSAEDAARAYDNAAITLRG 72 7********.**********743...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MRRGRAAADT AVRVAPITGS ERRYRGVRRR PWGRFAAEIR DPLKKTRVWL GTFDSAEDAA 60 RAYDNAAITL RGPKAKTNFP LPTPTSFFDY PPPCPIPDLT NPHRPTSSTL SSTVESFSGP 120 RPPSAAAATS ASRRYPRTPP VVPEDCHSDC DSSSSVIDDG DIASSSMIRR KSPLPFDLNI 180 QPSDHLDFGG DDLRRTALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 4e-14 | ERF family protein |