PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022948397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 668aa MW: 76692.9 Da PI: 5.3775 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 68.2 | 2.1e-21 | 60 | 142 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+ YAke GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++ +w+++++el+HnH ++ XP_022948397.1 60 FYSCYAKEQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMDTRRWRIIEVELDHNHLIN 142 9***************99997.66779**************99888.....***********************************775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 668 aa Download sequence |
MDGVSLNTDP VGDEEADYFE IEGDSVLADY VDQTGMFQGE NPLPPAVGME FESYEDVYYF 60 YSCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKK SEANRPRPET RTGCPAMIKF 120 RLMDTRRWRI IEVELDHNHL INPTSGKFYK SHKNLGVGTK RLLQLDSAEE VQKVRLFRTV 180 VVDADHNGFL DVDEGEFGNS VDDSNQLKFN EGDAVAVEDF LCQAQLTDSN FFYVVDLNEK 240 GSLMNLFWVS SRSKAAYNYF GDVVYIDTSC LANKYEVPLV SIIGINHHGQ SVLFGCGLLA 300 MEAAESYIWL FRAWLTSILG RPPQVIIADQ CVALQIALAD VFPRAYHCIS LSDIMRKVPQ 360 KLGSLIEYEE IETAICKAVY HSSKPEQFEA VWEGMIQQHM LGDHKWLQAI YEDRRRWVPV 420 FVKDVFLAGV LSIQSSDTVS CFFQEYLGVH TSLREFLAKY DRALQSRYQL EALADADSKS 480 SSFMLRSRCY FELQISKLYT NEILKKFERE VEGMYSCFST RKLNAEGSLV TYIVKEHVEM 540 EGSRRDARDF EVLYNESEME VQCNCGLFNS KGYLCRHTLS VLNQNGIEEI PPQYILPRWR 600 KDVKRSYVLD YSYSGIDINS QIHRYDNLYR SIVQVIEEGR KSKERYDIAI QGINDILSKL 660 RLGTNPSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 0.0 | FAR1 family protein |