PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948122.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 452aa MW: 49762.9 Da PI: 8.5686

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948122.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.3e-32	172	229	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgse+prsYY+Ct+++Cpv+k+ve+s +++++ei+Y+++Hnh+k XP_022948122.1 172 DDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL-NGQITEIVYKSKHNHPK 229 8**************************************.*************85 PP
2	WRKY	101.1	6.5e-32	329	387	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy WrKYGqK+vkg+++prsYY+Ct+agC v+k++er+++d k+v++tYeg+Hnhe XP_022948122.1 329 LDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVITTYEGKHNHE 387 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MVMEFFFSSR VEEDPTDGRP RLPESTAPPI SSKFSSTPNP NPPLLSAMSQ PLFSPSSFFT 60 IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTSHHQKNM KQEQHNLAEF SFPRTNPTKS 120 SSSSSIMFQS SSMQNQAWVS QAAFNFPPET TVNGGSKSDQ HPQSQPKNRA SDDGYNWRKY 180 GQKLVKGSEN PRSYYKCTHP TCPVRKQVEK SLNGQITEIV YKSKHNHPKP EFPRRLSSAS 240 SSSSSSSSSS WLSQALPQTM AVEPKHSMAS DSVPTPENSS TMIGDDDSDE LDAKRWKSES 300 ENEIILVAGG KTVREQRVVV QTISRVDKLD DGYWWRKYGQ KVVKGNPNPR SYYKCTYAGC 360 GVRKHIERAS HDLKAVITTY EGKHNHEIPA ARGGGSRPVS NNHGNDNGHA SNGGSGDIWP 420 SSEVSGGDDG FSNMLWRTKE DAADEIFRSL LD

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MVMEFFFSSR VEEDPTDGRP RLPESTAPPI SSKFSSTPNP NPPLLSAMSQ PLFSPSSFFT  60
IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTSHHQKNM KQEQHNLAEF SFPRTNPTKS  120
SSSSSIMFQS SSMQNQAWVS QAAFNFPPET TVNGGSKSDQ HPQSQPKNRA SDDGYNWRKY  180
GQKLVKGSEN PRSYYKCTHP TCPVRKQVEK SLNGQITEIV YKSKHNHPKP EFPRRLSSAS  240
SSSSSSSSSS WLSQALPQTM AVEPKHSMAS DSVPTPENSS TMIGDDDSDE LDAKRWKSES  300
ENEIILVAGG KTVREQRVVV QTISRVDKLD DGYWWRKYGQ KVVKGNPNPR SYYKCTYAGC  360
GVRKHIERAS HDLKAVITTY EGKHNHEIPA ARGGGSRPVS NNHGNDNGHA SNGGSGDIWP  420
SSEVSGGDDG FSNMLWRTKE DAADEIFRSL LD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-87	WRKY family protein