PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948077.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 383aa MW: 42199.2 Da PI: 8.6129

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948077.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.7e-05	145	168	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F+ + +L++H+ H XP_022948077.1 145 FPCTACGEIFPKPQLLEQHQAAkH 168 89******************8777 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MAPTATGSFC NKFLALLLLI LHVGCFLLTN GDNRRRRHRP LQPKKRNESP PTALSLKPQK 60 ALTSSISFLK RIFSSKTCKM AIETARPPST PARSSQHSIV TLIPQPVDTP NSKNANPIDS 120 AGTPQDSDIT TAEINQFFPL RNDIFPCTAC GEIFPKPQLL EQHQAAKHAV SELADSDSGK 180 NIVRIIFETG WTSREKSPKI IRILKVHNSQ KILSRFEEYR ESVKAKAARN GGAVKRWDER 240 CIADGNELLR FHCSTFLCDL GQNGNSSICG QQFCSICGII KSGFSHKLDG ISTLSSSWRA 300 HVAIPEDIEE EFKFMNVKRA ILVCRVVAGR IGSDNDEPEK DGGGFDSVVG RSGSGAQTTV 360 DEEEMLVFNP RAVLPCFAIV YEV

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MAPTATGSFC NKFLALLLLI LHVGCFLLTN GDNRRRRHRP LQPKKRNESP PTALSLKPQK  60
ALTSSISFLK RIFSSKTCKM AIETARPPST PARSSQHSIV TLIPQPVDTP NSKNANPIDS  120
AGTPQDSDIT TAEINQFFPL RNDIFPCTAC GEIFPKPQLL EQHQAAKHAV SELADSDSGK  180
NIVRIIFETG WTSREKSPKI IRILKVHNSQ KILSRFEEYR ESVKAKAARN GGAVKRWDER  240
CIADGNELLR FHCSTFLCDL GQNGNSSICG QQFCSICGII KSGFSHKLDG ISTLSSSWRA  300
HVAIPEDIEE EFKFMNVKRA ILVCRVVAGR IGSDNDEPEK DGGGFDSVVG RSGSGAQTTV  360
DEEEMLVFNP RAVLPCFAIV YEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	1e-113	C2H2 family protein