PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022947817.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 253aa MW: 28359.8 Da PI: 6.9427 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 69.2 | 7.5e-22 | 103 | 154 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 ++++GVr+++ +grW+AeIrdp+ r kr++lg+f taeeAa+ +++a++kl+g+ XP_022947817.1 103 KKFRGVRQRP-WGRWAAEIRDPT----RrKRIWLGTFNTAEEAAAVYDRAALKLHGP 154 59********.**********84....34**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MSVGEMGFFP ERRINHRRKP PSSGDSLELQ QKLVRIIVTD ADATDSSSDD EMVSGSTKGI 60 RRQVREIPIG CYSVFYGSSE SPVPAISKKR STRSQSSKSF HRKKFRGVRQ RPWGRWAAEI 120 RDPTRRKRIW LGTFNTAEEA AAVYDRAALK LHGPNAETNF PDEGEVSTAA KGGNKQEDGL 180 KSPKTTAVWS PASVLHYDGA LPLIDEMFCR EIDEFEFNME AVARLPAARR QCGGEEDFGE 240 VELDLDYFLV DVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11140.1 | 2e-26 | ERF family protein |