PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022947795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 214aa MW: 24447.4 Da PI: 8.1918 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 158 | 3.8e-49 | 23 | 151 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv++yL++kv++k+++l e ik++diy+++Pw+Lp +++ekewy F+kr +ky+++ r+nr+t +g+Wkatg dk+++s+ XP_022947795.1 23 PGFRFHPTDEELVDYYLRRKVHNKSVTL-ELIKQIDIYRYNPWELPyIGGTSGEKEWYVFVKRGRKYKNSVRPNRVTGAGFWKATGIDKPIYSQg 116 9************************999.89***************545567899**************************************85 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfykg+a +g+kt+W+mhe+rl XP_022947795.1 117 eqGKGCIGLKKTLVFYKGSAGRGVKTEWMMHEFRL 151 444444***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MAAAAAATTT TDFDMDDYQF PLPGFRFHPT DEELVDYYLR RKVHNKSVTL ELIKQIDIYR 60 YNPWELPYIG GTSGEKEWYV FVKRGRKYKN SVRPNRVTGA GFWKATGIDK PIYSQGEQGK 120 GCIGLKKTLV FYKGSAGRGV KTEWMMHEFR LPPSNGSNSH NSHNSHNSHL PKTIINGDQE 180 AGTGDLDAMS YIQTECYVSK IYTELERNDE DQKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43000.1 | 1e-69 | NAC family protein |