PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947223.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 740aa MW: 82540.7 Da PI: 6.0357

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947223.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.6	5.8e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_022947223.1 52 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MQTDSILSSN SETHLLSETI IAHVGDQGIA ASTPDRVIEP LPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KTVRKRPLQG ENCPPPMPNA 180 VSNQSRALGH DGRAVKLVLV DTQNIPKLGH RKTASRRNVN VGINRGNNGG YPTVLKPSRQ 240 RRKSEGVSSA AYKKWEKAAI AGVSLVADAA EHLERTITNR DVLHDQNTVG EKNSDPVGSP 300 LLLLAPLQPN SLIDVANTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH 360 LSRKWGNSSA AHGALMLFPY SMQKKCLAEC QRWTQDSFES AGDVYAAIGR PQVFRLRYGW 420 CSNAEIGSPE LQTSVPAYCI QDDHIIDARD IDGRIVDLAS INDQPVGLNK DEVGTLNDNM 480 STPTVPNETE RFICGRLDDL PRSSDPTLNI SWDKKDVADR TFIQRSDDVD DLKLSNETSL 540 SAGEWADSLT NINIGDLLSG VSQDVDPNCI DTPLTEGIQC LQQIPFSCDS FDAAIAAHIS 600 RQQDKTVSQP TLASHVSSIW DAEETCDAFS FQKNPVILQE ELLSDSPPED HNQGDPMDEC 660 QSDPQISETK DLNELADIYW PDSLGPLDLD LPSTNKYHSE DLILGDSLSS LNRLIASSLD 720 AFQNCSFFGF DKKESSTFNS

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MQTDSILSSN SETHLLSETI IAHVGDQGIA ASTPDRVIEP LPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KTVRKRPLQG ENCPPPMPNA  180
VSNQSRALGH DGRAVKLVLV DTQNIPKLGH RKTASRRNVN VGINRGNNGG YPTVLKPSRQ  240
RRKSEGVSSA AYKKWEKAAI AGVSLVADAA EHLERTITNR DVLHDQNTVG EKNSDPVGSP  300
LLLLAPLQPN SLIDVANTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH  360
LSRKWGNSSA AHGALMLFPY SMQKKCLAEC QRWTQDSFES AGDVYAAIGR PQVFRLRYGW  420
CSNAEIGSPE LQTSVPAYCI QDDHIIDARD IDGRIVDLAS INDQPVGLNK DEVGTLNDNM  480
STPTVPNETE RFICGRLDDL PRSSDPTLNI SWDKKDVADR TFIQRSDDVD DLKLSNETSL  540
SAGEWADSLT NINIGDLLSG VSQDVDPNCI DTPLTEGIQC LQQIPFSCDS FDAAIAAHIS  600
RQQDKTVSQP TLASHVSSIW DAEETCDAFS FQKNPVILQE ELLSDSPPED HNQGDPMDEC  660
QSDPQISETK DLNELADIYW PDSLGPLDLD LPSTNKYHSE DLILGDSLSS LNRLIASSLD  720
AFQNCSFFGF DKKESSTFNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein