PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945877.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 314aa MW: 36308.4 Da PI: 8.192

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945877.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.9	8.8e-06	22	42	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cg F+ + +Lk+H+++H XP_022945877.1 22 CLECGAAFKKPAYLKQHMQSH 42 99*****************99 PP
2	zf-C2H2	17.7	9.6e-06	48	72	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C+ s++rk++L+rH+ H XP_022945877.1 48 YICTvdGCDASYRRKDHLTRHLLQH 72 899999***************9887 PP
3	zf-C2H2	15.1	6.8e-05	77	102	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ F s L+rH+++ H XP_022945877.1 77 FKCPieNCSREFAYLSCLNRHLKVfH 102 89*********************988 PP
4	zf-C2H2	20.6	1.2e-06	115	139	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk F+ s+L++H +H XP_022945877.1 115 FVCPedECGKEFRYASQLQKHEDSH 139 89*******************9888 PP
5	zf-C2H2	16.7	2e-05	207	231	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 +C+ C+ +Fs++snL++H ++ H XP_022945877.1 207 RCTheGCSNVFSTSSNLRQHVKVvH 231 688889***************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MESGKYKDDG DDKAKDRKSN ICLECGAAFK KPAYLKQHMQ SHSLERPYIC TVDGCDASYR 60 RKDHLTRHLL QHQGMIFKCP IENCSREFAY LSCLNRHLKV FHEGDTPEVE CQKRFVCPED 120 ECGKEFRYAS QLQKHEDSHA KLDSVEACCS ELGCMKTFTN KQCLKAHMQS CHQYIECEIC 180 GEKKLRKNIK QHLRQKHESD GPQTTIRCTH EGCSNVFSTS SNLRQHVKVV HLGQKPFACC 240 FPGCGMRFGY KHVRDNHEKS GQHVYTDGDF EVADERFRSK PRGGRKRVCP TVEMLIRKRV 300 TPPTELNFMM DEDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-118	C2H2 family protein