PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945767.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 450aa    MW: 50975 Da    PI: 9.7769
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945767.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.0001388410123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kCp+C+k F++   L  H r+H
  XP_022945767.1 388 HKCPICSKAFKSGQALGGHKRSH 410
                     79******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MENSKENKFV CNFCHKIFTC GKSLGGHIRI HKNEKAPRVA EKQKERTSIV KLQVPIERRR  60
SKRDLESEVA NGNSSYGLRE NPKITRRFAD SVFTSRKEKF CRECGEGFQS SEALCYHLDC  120
HSENKRDNKR LEYDYRIIHQ KRDLIGNQSD ERVQEAALSL MMMSKALRFS GLEGLNSVSE  180
SSDSKSSSRH FRESDTSTSN SNGRLEMKTH SEYGGENSNS GNFRNELCKK VKLKVSINGP  240
FMDDEYKIPD VKFGVRIGRS SADILKNSMK TQKSYDKVPA ASYKYELRKR LRNDLYSPDL  300
WEGSSRKISN DYAIHSGIVR TQHHRESQTR MSNGYEWTHQ SGENSVNITT NSISIPAREI  360
IESSSGKNKS QQDTSGNEEK KLGPKRKHKC PICSKAFKSG QALGGHKRSH VVGSLEDASI  420
VTRQESNGVT GLIDLNVPAP MEEEESGRWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.15e-25C2H2 family protein