PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022945750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 268aa MW: 29319.8 Da PI: 6.8592 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00016 | 104 | 126 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs++ L H++ H XP_022945750.1 104 FSCNFCKREFSTSQALGGHQNAH 126 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MAEIEASSIS AASGGDDGGR PVAVKLEKMV VDEVDGGDRQ SSQEPNSRLL LDLKLSNEES 60 DEGSPEILKR IVSAPPPPPP VTVDSSSSHG HANELSSNSK SRVFSCNFCK REFSTSQALG 120 GHQNAHKQER AMAKRCQGME LGGGRPPYLA SYYPYTALSS HSFYGSSLGV RMDSMIHKPS 180 YRWLKSPGLQ FHGSLASRPT LNNLRISAFQ AQNGGFRLTT MMNNNVESTR RFDEDRAILI 240 PNLNLSEPVL KIEHHVDDGH ELDLSLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80730.1 | 2e-20 | C2H2 family protein |