PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022945217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 369aa MW: 42374.2 Da PI: 6.7059 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.0005 | 79 | 101 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_022945217.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP | |||||||
2 | zf-C2H2 | 16.5 | 2.4e-05 | 106 | 130 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H XP_022945217.1 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP | |||||||
3 | zf-C2H2 | 21.7 | 5.3e-07 | 136 | 160 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH XP_022945217.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP | |||||||
4 | zf-C2H2 | 18.8 | 4.5e-06 | 166 | 190 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk+F + + Lk+Hi +H XP_022945217.1 166 HICPypDCGKRFAHEYKLKNHITSH 190 679999*****************96 PP | |||||||
5 | zf-C2H2 | 13.9 | 0.00017 | 229 | 254 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+r+ H XP_022945217.1 229 YACPyeGCEKAYIHEYKLKLHLRReH 254 89**********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
METYFNHNLF ERRPIVKNKT PAAKWIKEWV PQDVVATGGK CLLLKWVTED TLKALKEKTK 60 QSEAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRFAHE 180 YKLKNHITSH HEKNMTAEVV KYTPPTEKQT KVSKPSGGAY ASASSDRPYA CPYEGCEKAY 240 IHEYKLKLHL RREHPGHLVE DNGNAHHNGE NEIEGSDQDG YGGKRVNTKN QKQNKPKPKL 300 KLPPSKISQR KGTTPSPAPM SSVKKPWPAK EETYEEEDSE ETEEDRENVE EGWQYAENED 360 DDEETEYED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 1e-143 | C2H2 family protein |