PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945183.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 355aa    MW: 39332.5 Da    PI: 5.6978
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945183.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.28.1e-29122183159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYGqK + g+++pr+YYrCt++   gC ++k+v+rs++dp++++itY+g+H+++
  XP_022945183.1 122 LDDGFSWRKYGQKGIFGAKHPRGYYRCTHRnlqGCVATKQVQRSDDDPTIFKITYRGNHTCS 183
                     59***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MENLGEWERK NLQNELLKGK EFARQLRVHL NVRPSTSSMA AASSSSSYDG GELLVQKILS  60
SYEKALSLLS STKSPSSLNA SPRSEDSDHI AQTNAASRKR NILPTWTLKF QVTPGMALEG  120
SLDDGFSWRK YGQKGIFGAK HPRGYYRCTH RNLQGCVATK QVQRSDDDPT IFKITYRGNH  180
TCSQVSNLGT TPAAPEFQQQ NRRIDQNLVQ SQQTSPDALL NSWASLRIIT ENLDTVHEPI  240
LFSPFSYDPT SSYEAADRIE STSTVDMNFT EFSPSFLSTT RCGSGVSYFS GSSSEMSEGF  300
IGNQKLELQP NKSELPEIFS SPTSGVNSQT LGLDFPSGEL EMEPSFTFDN TTFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.14e-43WRKY family protein