PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022945007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Nin-like | ||||||||
Protein Properties | Length: 254aa MW: 29955.2 Da PI: 6.3805 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 76.5 | 3e-24 | 143 | 192 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k + l++++k+F+ pi++AAk ++v+lTvLKr+CR++ I+RWPhRk+ksl XP_022945007.1 143 KVLGLDEIQKHFDIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSL 192 67899*******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MEPSAKLHPH DFDFEWPYHQ HLFPFDHEAL ELPPLDVDAS FDFNSLSLPF HWDDISELEA 60 EILWLDKHMI PVTPLNDEDM LAVDETKAER MVKLKDNDGT SRELQEETRV IETGLSSCKE 120 NEEEEECERR MRLIMRNGRR KSKVLGLDEI QKHFDIPITE AAKAMNVGLT VLKRRCRELH 180 IMRWPHRKLK SLNSLITNVQ EMGLTNEIKG LEEHKRLVEE LPDTDLTHRT RRLRQACFKA 240 NYKKKRRSNV AALR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 243 | 247 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53040.1 | 8e-36 | Nin-like family protein |