PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944380.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 506aa MW: 56874.8 Da PI: 7.3368

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944380.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	1.9e-19	22	77	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++ql +Le++++ ++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_022944380.1 22 KKRKLKTPTQLIALEKFYNDHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 77 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MEQELGNAMH SEENKDSTEK NKKRKLKTPT QLIALEKFYN DHKYPTEEMK SQLAEQLGLT 60 EKQISGWFCH RRLKDKRFCE TYTSVRQDRS SGVIQDHGSG LAQDSCGSTK NGDYWHVDPR 120 EVESQKPYGR ELATDNVLER RSHYAENVSN MENTSSESSS SLKDRLLSQS ENPYDTEVSQ 180 YLTHDSAFPP SNPKALNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPSLGVEF 240 QPLPPGAFES QAKGPIHDSY YVGNALLPRS PDTLTMKKQR ALVSRYEVLS SNMSSQDSYM 300 EEAAPTGITC RPECQENNSI YPLKKSSNYY NKTEPFPRQN SPLNMYEESG GLTLSSSSKR 360 DHRMNSDYNV PRSRTGSVSN NHGSYSSKVA SEQTEMPLHN RGSVGSKSFC RSGYLDYNPK 420 KMPKEMFNGE EKAVNESSDP VRGKIPPTNE LTVAYRCPLD LPRSGYAAKA SFSEKPGRKN 480 HTSRSTMEMP YSFTVDEAED TSSSLD

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MEQELGNAMH SEENKDSTEK NKKRKLKTPT QLIALEKFYN DHKYPTEEMK SQLAEQLGLT  60
EKQISGWFCH RRLKDKRFCE TYTSVRQDRS SGVIQDHGSG LAQDSCGSTK NGDYWHVDPR  120
EVESQKPYGR ELATDNVLER RSHYAENVSN MENTSSESSS SLKDRLLSQS ENPYDTEVSQ  180
YLTHDSAFPP SNPKALNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPSLGVEF  240
QPLPPGAFES QAKGPIHDSY YVGNALLPRS PDTLTMKKQR ALVSRYEVLS SNMSSQDSYM  300
EEAAPTGITC RPECQENNSI YPLKKSSNYY NKTEPFPRQN SPLNMYEESG GLTLSSSSKR  360
DHRMNSDYNV PRSRTGSVSN NHGSYSSKVA SEQTEMPLHN RGSVGSKSFC RSGYLDYNPK  420
KMPKEMFNGE EKAVNESSDP VRGKIPPTNE LTVAYRCPLD LPRSGYAAKA SFSEKPGRKN  480
HTSRSTMEMP YSFTVDEAED TSSSLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	4e-84	HB-other family protein