PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022944064.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 218aa MW: 24277.3 Da PI: 6.3004 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.6 | 0.00085 | 89 | 108 | 2 | 21 |
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk+F ++ L H+r XP_022944064.1 89 PCTECGKTFWSWKALFGHMR 108 5******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MSTKTTPPPS FYSFTSNSLP IMDSPSHSLF PFTVFPPPSP SHSSLPPPNS RRKRTKFIKP 60 TAAPLHSPST PKSKHAKKPD PTAPKITRPC TECGKTFWSW KALFGHMRCH PERQWRGINP 120 PPNFRRSTAT DEDHEIAACL IMLANGPNAI DPTEAVTETD GDCRENQELT ALVFEQIDDD 180 DDDHGYLDLN LPPPMEDIEE RSSSYCSGIV LDLRLGPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35280.1 | 4e-38 | C2H2 family protein |