PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022943974.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 153aa MW: 16926 Da PI: 10.2886 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 183.5 | 1.2e-56 | 1 | 143 | 23 | 169 |
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvir 117 +vsvP + +f++vtvrCGhC++llsvn+ + q+l+ ++ + ++++++ ++ +++ s ++++s+s+ ++ +l ++ +++ r+pp ir XP_022943974.1 1 MVSVPCNNMFTLVTVRCGHCSNLLSVNMGASLQVLPPQDS--HPGNKQQQVSGGDWSKDRGSSSSSSSSSSKCTKIASL-DSAERDQHRIPP-IR 91 59**********************************9997..3333333333333333333333333333333344334.344455566677.9* PP YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 PPek+qrvPsaynrfikeeiqrika+nPdishreafs+aaknWah+P+i g XP_022943974.1 92 PPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIRCG 143 ************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MVSVPCNNMF TLVTVRCGHC SNLLSVNMGA SLQVLPPQDS HPGNKQQQVS GGDWSKDRGS 60 SSSSSSSSSK CTKIASLDSA ERDQHRIPPI RPPEKKQRVP SAYNRFIKEE IQRIKANNPD 120 ISHREAFSTA AKNWAHYPHI RCGQKVDGNK QTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 2e-53 | YABBY family protein |