PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943339.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 283aa    MW: 30661.5 Da    PI: 9.5617
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943339.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.22.9e-32212269359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYeg+Hnh+
  XP_022943339.1 212 DDYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERASDDPSMLIVTYEGDHNHS 269
                     99************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MAVELLSACT NTQLSASMDQ DSAVQEAATG LHTLKNLITL LSHSHPSNLD SDCQAVANSA  60
VSHFKKAISL LGRSPRTGHA RFRRAPLDSS KIYNATPIQQ IPPPVERLES ATTINFSYSS  120
APNGSFLTSI PGADSEINLQ HEPSSSSFQI TDLSRASSGL KRKCGSENLG SGKCSVSSGG  180
RCHCSKKSRK MRLKRVVRVP AISSKNADIP PDDYSWRKYG QKPIKGSPYP RGYYKCSSLR  240
GCPARKHVER ASDDPSMLIV TYEGDHNHSQ SVAEASSLIL ESW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.13e-81WRKY family protein