PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943242.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 228aa    MW: 26110.4 Da    PI: 9.7351
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943242.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.61.9e-1263114155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r+ h ++Er+RR+++N+ +  Lr+++P++   + ++ + a+i+  +++++k+L+
  XP_022943242.1  63 QRMVHIAVERNRRKQMNEYLCVLRSMMPSS---YTQRGDQASIVGGTIKFVKELE 114
                     7999**************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVLGLESAVF QEDKLIGCGW KNVEAMEAGK VGGGGLRATV APVGKRWGRR GKMVKKREEI  60
EKQRMVHIAV ERNRRKQMNE YLCVLRSMMP SSYTQRGDQA SIVGGTIKFV KELEQLVQWL  120
EGKKQRHEHI CYSGQDYSGE SKVEVRVIER YANIKMRAEN RPKQLLKVAL ELHSLQLLIL  180
HVNVTTIRQM VFYCFSVKIE DECELNTVGE ITAAVNQMFQ RILVEKGD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16475RMVHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.14e-52bHLH family protein