PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942790.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 183aa    MW: 20172.4 Da    PI: 8.1365
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942790.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.8e-057294123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C k F+++  L  H++ H
  XP_022942790.1 72 FECQYCLKEFRNSQALGGHQNAH 94
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MGKNSSSYNL EEHESGLFAS TSNVEKKVKL FGFELNPSKN HELGSSSCLN GEGDESVNSS  60
TTVCFERAEP KFECQYCLKE FRNSQALGGH QNAHKKERLK KKKEKMELQA TNASLTYLLY  120
THNSSQISFS QNGAKFIHFD GSVPPADKAV GYVSSSSSSS SSLPVCNDHR RSCKSLDLQL  180
GFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197103ERLKKKK
298104RLKKKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.14e-12C2H2 family protein