PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942123.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 237aa    MW: 25948.2 Da    PI: 7.0159
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942123.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB181.66.5e-5790186197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy++plk yl++yrele 
  XP_022942123.1  90 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYRELEC 184
                     69********************************************************************************************9 PP

           NF-YB  96 ek 97 
                     + 
  XP_022942123.1 185 DA 186
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MSVFFSNVRS SFSFKNIYSA NLHSSFSTFR SSFAIFFILS LSLCAPNTNS LIFPSSLWIP  60
DLPHMADPPT SPAGGSHESG GEQSPHTGGV REQDRYLPIA NISRIMKKAL PANGKIAKDA  120
KDTVQECVSE FISFITSEAS DKCQKEKRKT INGDDLLWAM ATLGFEDYID PLKSYLTRYR  180
ELECDAKGSS RGGEESAKRD AVGALPGQNS QYLQPGALTY INTQVIISSL STCQHAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.15e-77NF-YB family protein