PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942119.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YB

Protein Properties

Length: 270aa MW: 29789.5 Da PI: 6.7848

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942119.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	178.4	6.5e-56	90	184	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy++plk yl++yre+++ XP_022942119.1 90 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYRECDA 184 69******************************************************************************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MSVFFSNVRS SFSFKNIYSA NLHSSFSTFR SSFAIFFILS LSLCAPNTNS LIFPSSLWIP 60 DLPHMADPPT SPAGGSHESG GEQSPHTGGV REQDRYLPIA NISRIMKKAL PANGKIAKDA 120 KDTVQECVSE FISFITSEAS DKCQKEKRKT INGDDLLWAM ATLGFEDYID PLKSYLTRYR 180 ECDAKGSSRG GEESAKRDAV GALPGQNSQQ YLQPGALTYI NTQLGSSKNQ GILKVMSTNL 240 LHGGIHEQMS YEYPFFWDSI LIAPSMQNNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	2e-72	NF-YB family protein