PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941907.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 606aa    MW: 66424.8 Da    PI: 4.5423
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941907.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS357.71.7e-1092346062374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++Ll+cA+  +s +  +a ++L r+ +   ++gdp++R+a+yf eAL++rl+       + +  s +++ ns++ l ++k++++++P+ kf+hl
  XP_022941907.1 234 LKVLLDCARLCDS-EPDRAVKTLDRIGKSLLEHGDPIERVAFYFGEALRNRLSP---AARNNFMDSIETDANSEDFLLSYKALNDACPYSKFAHL 324
                     679******8877.7889999********************************9...33333444444456799********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+++++++Hi+Df+i qG+QW+aLlqaL++R+ g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +ed
  XP_022941907.1 325 TANQAILEATQRASKIHIVDFGIVQGVQWAALLQALTTRATGKPiKVRISGIPAPSLGesPAASLYATGNRLSEFAKLLELNFEFEP-ILTPIED 418
                     ****************************************88887**********99998999************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ ++++++++E+laVn++lql+ llde        ++ L+l kslsPk+v++ e ea++n+++F +rf +al+yysa+f+sle +lpr+s er 
  XP_022941907.1 419 LNKSSFSIQSDEVLAVNFMLQLYGLLDEVPVGV---HNALRLAKSLSPKIVTLGEYEASLNRTEFYNRFKNALKYYSAIFESLEPNLPRDSPERL 510
                     **************************6644444...48********************************************************* PP

            GRAS 284 kvErellgreivnvvace...gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                      +E+ l+gr+i  v+ +e   g++rr r+e +e+W++ +e++GF+pv+ls++a +qak ll +++ +  y++ e+  +++ l W+d pL++vS+W
  XP_022941907.1 511 QLEKLLIGRRIAGVIGTEeesGSKRRVRMEDKEEWKNLMESSGFEPVALSHYAISQAKILLWNYNyNSLYSLIESAPEFLsLAWNDVPLLTVSSW 605
                     ***************988223456*****************************************9999***999999999************** PP

            GRAS 374 r 374
                     r
  XP_022941907.1 606 R 606
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    
MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ QQQQLCPLTP FSLLPWTTTN SSPTMASSSS  60
SPNLSFGVSG SAFADPFQVA GDADSAEPAF HFPNLEHPSA GFRFFPNFGG GEFDSDEWMD  120
SLVGGGDSTD SSTLPSGCDA YAEYGLFGVD LFNGSPSRLV VACSPPSDFN RAVLPESSCN  180
TSTVPPPPWS SPPPSIKDAR VANPPAEKLQ TNDVVEASSS APEEVLPSPP PPLLKVLLDC  240
ARLCDSEPDR AVKTLDRIGK SLLEHGDPIE RVAFYFGEAL RNRLSPAARN NFMDSIETDA  300
NSEDFLLSYK ALNDACPYSK FAHLTANQAI LEATQRASKI HIVDFGIVQG VQWAALLQAL  360
TTRATGKPIK VRISGIPAPS LGESPAASLY ATGNRLSEFA KLLELNFEFE PILTPIEDLN  420
KSSFSIQSDE VLAVNFMLQL YGLLDEVPVG VHNALRLAKS LSPKIVTLGE YEASLNRTEF  480
YNRFKNALKY YSAIFESLEP NLPRDSPERL QLEKLLIGRR IAGVIGTEEE SGSKRRVRME  540
DKEEWKNLME SSGFEPVALS HYAISQAKIL LWNYNYNSLY SLIESAPEFL SLAWNDVPLL  600
TVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein