PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941657.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 280aa    MW: 30675.3 Da    PI: 7.1548
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941657.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.92.4e-182166147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W+++Ed  l+++v+++G+++W++I+  ++ gR++k+c++rw + 
   XP_022941657.1 21 KGSWSPQEDATLIKLVEEHGPRNWSLISTGIP-GRSGKSCRLRWCNQ 66
                     799*****************************.***********985 PP
2Myb_DNA-binding56.46.8e-1875117347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+ Ed l+v+a++ +G++ W+tIar ++ gRt++ +k++w++ 
   XP_022941657.1  75 PFTPAEDSLIVQAHAVHGNK-WSTIARLLP-GRTDNAIKNHWNST 117
                      89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MVLIGIPLAN RTSNSNSVRI KGSWSPQEDA TLIKLVEEHG PRNWSLISTG IPGRSGKSCR  60
LRWCNQLSPA VQHRPFTPAE DSLIVQAHAV HGNKWSTIAR LLPGRTDNAI KNHWNSTLRR  120
RRDADFSSDS TAFMKRPSCE VSRSASDDDD DSEGSFKRRC FGMAVERNGG GEGEGEGPET  180
SLRLSLPGEV VVPAACVKVK EEVTVDSEEN DGRRHVTVAA TAEEKGNRKR EMDESCMATI  240
MQRMIAREVR NYIDSLRAHG GLSIGPNIGP GLDSGVQDTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-51MYB family protein