PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941209.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 618aa MW: 71505.7 Da PI: 7.7761

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941209.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.5	5.2e-24	59	143	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YAke+GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++ +++ ++++w++ ++eleHnH+++ XP_022941209.1 59 DFYNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMIIIRLVDTKRWRIVEVELEHNHPVN 143 6*******************999*************99888.....9********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MEEVCLNSEP IFDECDEYEV DGDGAFVDNG NESGEAQSKK NPPLPTVGLE FDSFDEAYDF 60 YNVYAKELGF GIRVSNSWFR SKRKERYRAK LSCSSAGFKK KSEANNPRPE TRTGCPAMII 120 IRLVDTKRWR IVEVELEHNH PVNPQITRFY KSHKKMILAA KKAQPQLHPV TEVHTIKLYR 180 STTLNGCSGC SNVDQREGIS SVDHLKHLEL KDGDGHALYN YFCRMKLTNP NFFYLMDLDN 240 DGHLRNVFWA DARSRTTYSY FCDTITIDTT CLTNRYEIPL ISFVGVNHHG QSVLLGCGFV 300 GFESVECFVW ILKAWLQCML GCSPQVIITD QNKTLVAAVS EVFPKACHCY STWYIMQRVP 360 EKLGGLKGYE TIRSQLNKTI FSSLKIAEFE ISWTNMIKHN ALGDNKWLQS LYEDRTLWAP 420 VYLKDIFFAG MVPIHANESF KTFFDGYVHK HTSFKEFLDK YDLALHRKYH KVSVADLESR 480 NLSLELKTRC NFELQLSKVY TKDIFSKFQS EVEGMYSCFN TRQVSVNGPI VTYIVKERIE 540 VEGNEKEVKY FEVLYETTEV DIRCICSLFN YKGYLCRHAL NVLNYNGVEE IPARYILPRW 600 CKDFKRSCRG RCTISRTL

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MEEVCLNSEP IFDECDEYEV DGDGAFVDNG NESGEAQSKK NPPLPTVGLE FDSFDEAYDF  60
YNVYAKELGF GIRVSNSWFR SKRKERYRAK LSCSSAGFKK KSEANNPRPE TRTGCPAMII  120
IRLVDTKRWR IVEVELEHNH PVNPQITRFY KSHKKMILAA KKAQPQLHPV TEVHTIKLYR  180
STTLNGCSGC SNVDQREGIS SVDHLKHLEL KDGDGHALYN YFCRMKLTNP NFFYLMDLDN  240
DGHLRNVFWA DARSRTTYSY FCDTITIDTT CLTNRYEIPL ISFVGVNHHG QSVLLGCGFV  300
GFESVECFVW ILKAWLQCML GCSPQVIITD QNKTLVAAVS EVFPKACHCY STWYIMQRVP  360
EKLGGLKGYE TIRSQLNKTI FSSLKIAEFE ISWTNMIKHN ALGDNKWLQS LYEDRTLWAP  420
VYLKDIFFAG MVPIHANESF KTFFDGYVHK HTSFKEFLDK YDLALHRKYH KVSVADLESR  480
NLSLELKTRC NFELQLSKVY TKDIFSKFQS EVEGMYSCFN TRQVSVNGPI VTYIVKERIE  540
VEGNEKEVKY FEVLYETTEV DIRCICSLFN YKGYLCRHAL NVLNYNGVEE IPARYILPRW  600
CKDFKRSCRG RCTISRTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein