PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022940598.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 388aa MW: 43293.8 Da PI: 7.6892

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022940598.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	107.5	1.7e-33	9	91	47	128
NAM 47 LpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 Lp +k +e+ewyf+s rd+ky+tg r+nrat +gyWkatgkd+ev+s+ +g+l g+kktLvfy+grap+gekt+Wvmheyrl XP_022940598.1 9 LPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAsNGSLLGMKKTLVFYRGRAPRGEKTKWVMHEYRL 91 6766677999***********************************9978899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MVILMVAALP DVAKMGEREW YFYSLRDRKY PTGLRTNRAT GAGYWKATGK DREVYSASNG 60 SLLGMKKTLV FYRGRAPRGE KTKWVMHEYR LDGHFSYRHA CKEEWVICRI FHKNGEKKNP 120 MFPCHAYLLE SAAAAALSSS TTSNSLPPLL ETTPTTLIEC QSQAAMQAFQ NPFQIHQPPE 180 SDLKSFVSSV VSQSNLLSSN EQPLQQQQQP PYSHKPPPPP PPISINTISI TTNNINPIAN 240 ANSNTYTPSA SSSSSSSSLL PSILFKSLLS HQDSTVLLKQ QQQQQHQQQQ CDVFKQFKAE 300 ASFTTHFEPA EANSDFMDMM KMQPNPPSYH QHPMSFEMEC SSPPAAAAEV SVHDISTSIA 360 FTKAGYQTML DPHINIVHAH GESWPLDA

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MVILMVAALP DVAKMGEREW YFYSLRDRKY PTGLRTNRAT GAGYWKATGK DREVYSASNG  60
SLLGMKKTLV FYRGRAPRGE KTKWVMHEYR LDGHFSYRHA CKEEWVICRI FHKNGEKKNP  120
MFPCHAYLLE SAAAAALSSS TTSNSLPPLL ETTPTTLIEC QSQAAMQAFQ NPFQIHQPPE  180
SDLKSFVSSV VSQSNLLSSN EQPLQQQQQP PYSHKPPPPP PPISINTISI TTNNINPIAN  240
ANSNTYTPSA SSSSSSSSLL PSILFKSLLS HQDSTVLLKQ QQQQQHQQQQ CDVFKQFKAE  300
ASFTTHFEPA EANSDFMDMM KMQPNPPSYH QHPMSFEMEC SSPPAAAAEV SVHDISTSIA  360
FTKAGYQTML DPHINIVHAH GESWPLDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	3e-62	NAC family protein