PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022940035.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family DBB
Protein Properties Length: 265aa    MW: 28816 Da    PI: 4.6776
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022940035.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.61.1e-07434535
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHk 35
                     C+ +++ e+ lfC+ ++  lC +C    H+
  XP_022940035.1  4 QCDVCNKDEALLFCTADDAALCSTCDHRVHH 34
                    7******99******************9974 PP
2zf-B_box26.71.2e-085687435
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHk 35
                    + C+ ++e ++ lfC++++  lC+dC + +H+
  XP_022940035.1 56 PLCDICQERRAFLFCQQDRAILCKDCDFPIHS 87
                    78***************************994 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MKIQCDVCNK DEALLFCTAD DAALCSTCDH RVHHANVLAS KHLRFPLLHP NNNNFPLCDI  60
CQERRAFLFC QQDRAILCKD CDFPIHSVNE LTQKHDRFLL TGVKLSCESA GNVPSSSSMS  120
EKMANASSAP VSNSPSIAES STSNAQTVGA STDGCEAMNG VEYFIDAISG WHFDDFLDSS  180
STDAPPFGFF ELETSGDSFS SEDWGIRSPE EEAAVPLFCS EIEMEERKKG RTLKEKTRGG  240
GGGGGGDGGI SVPEVDLRPR RFRSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.15e-49DBB family protein