PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022940034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | DBB | ||||||||
Protein Properties | Length: 283aa MW: 30867.2 Da PI: 4.4515 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 23.4 | 1.2e-07 | 4 | 34 | 5 | 35 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 C+ +++ e+ lfC+ ++ lC +C H+ XP_022940034.1 4 QCDVCNKDEALLFCTADDAALCSTCDHRVHH 34 7******99******************9974 PP | |||||||
2 | zf-B_box | 26.6 | 1.3e-08 | 56 | 87 | 4 | 35 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+ ++e ++ lfC++++ lC+dC + +H+ XP_022940034.1 56 PLCDICQERRAFLFCQQDRAILCKDCDFPIHS 87 78***************************994 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MKIQCDVCNK DEALLFCTAD DAALCSTCDH RVHHANVLAS KHLRFPLLHP NNNNFPLCDI 60 CQERRAFLFC QQDRAILCKD CDFPIHSVNE LTQKHDRFLL TGVKLSCESA GNVPSSSSMS 120 EKMANASSAP VSNSPSIAES STSNAQTVGA STDGCEAMNG VEYFIDAISG WHFDDFLDSS 180 STDAPPFGFC KSDEVDGDWV FQFVDDLVEL ETSGDSFSSE DWGIRSPEEE AAVPLFCSEI 240 EMEERKKGRT LKEKTRGGGG GGGGDGGISV PEVDLRPRRF RSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75540.1 | 6e-51 | DBB family protein |