PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939656.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 536aa    MW: 60225 Da    PI: 4.5351
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939656.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.59.2e-5291361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l+pGfrFhPtdee+v +yL++kv+gk++++ + ++ +diyk+ePwdLp k k+k+++ ewyfFs+ dkky +++r+nrat++gyWk+tgkd++v 
  XP_022939656.1   9 LAPGFRFHPTDEEIVGYYLRRKVSGKPIRF-DPVSVTDIYKSEPWDLPgKsKLKSRDLEWYFFSPLDKKYGNSSRTNRATEKGYWKTTGKDRPVR 102
                     579**************************9.88***************6347777888************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + ++++vg+kktLv+++grap+g +++Wvmheyrl
  XP_022939656.1 103 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    
MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP VSVTDIYKSE PWDLPGKSKL  60
KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFVEEEWE  180
EDEELTLPGE EIVANKGSVD VSEDMHFEVD DIAQYFDGEL PCECTQLPSN CPQDASNHVM  240
LPNVLVENDN KPETCASETV ELQQSHKFFQ PEQYQMGANS EKDEHIDYLL DEPYPSVPDD  300
LALNEELFLE ANDLSNPAES DPTSFDLLEE YLTFFDADDN LHLDFEPSDI LGGEEPISGQ  360
AIPEEVEKEF MATKQASVAS VNDASTSKPN PEAIETDSKS PFLKRASYML GNIPAPPAFA  420
SEYPSKDMVI RLNSLAQTSS PAHVTAQMIR VRNSTPSGEL SSSLYGKNAD VDLILSFARH  480
RHQGERDDIV TQLPIFGAQS QKNGNMGSRG FLFFFLLFWV LILSVSFKVG SYIYTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-102NAC family protein