PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939655.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 537aa    MW: 60353.2 Da    PI: 4.5351
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939655.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.59.2e-5291361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l+pGfrFhPtdee+v +yL++kv+gk++++ + ++ +diyk+ePwdLp k k+k+++ ewyfFs+ dkky +++r+nrat++gyWk+tgkd++v 
  XP_022939655.1   9 LAPGFRFHPTDEEIVGYYLRRKVSGKPIRF-DPVSVTDIYKSEPWDLPgKsKLKSRDLEWYFFSPLDKKYGNSSRTNRATEKGYWKTTGKDRPVR 102
                     579**************************9.88***************6347777888************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + ++++vg+kktLv+++grap+g +++Wvmheyrl
  XP_022939655.1 103 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP VSVTDIYKSE PWDLPGKSKL  60
KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFVEEEWE  180
EDEELTLPGE EIVANKGSVD VSEDMHFEVD DIAQQYFDGE LPCECTQLPS NCPQDASNHV  240
MLPNVLVEND NKPETCASET VELQQSHKFF QPEQYQMGAN SEKDEHIDYL LDEPYPSVPD  300
DLALNEELFL EANDLSNPAE SDPTSFDLLE EYLTFFDADD NLHLDFEPSD ILGGEEPISG  360
QAIPEEVEKE FMATKQASVA SVNDASTSKP NPEAIETDSK SPFLKRASYM LGNIPAPPAF  420
ASEYPSKDMV IRLNSLAQTS SPAHVTAQMI RVRNSTPSGE LSSSLYGKNA DVDLILSFAR  480
HRHQGERDDI VTQLPIFGAQ SQKNGNMGSR GFLFFFLLFW VLILSVSFKV GSYIYTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-102NAC family protein