PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938731.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 553aa MW: 61906.9 Da PI: 4.4582

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938731.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.6	6e-50	10	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelvv+yLk k+ g+kl+l ++i+e+d+yk+eP++Lp + k+k+++++w+fFs+r+++y++ +r +rat++gyWkatgkd+ + + XP_022938731.1 10 PPGFRFHPTDEELVVYYLKFKICGRKLKL-DIIRETDVYKWEPEELPgQsKLKTGDRQWFFFSPREHRYPNASRLSRATRHGYWKATGKDRIIQC 103 8**************************.99**********963589999**********************************99 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy grap+ge+tdWvmhey+l XP_022938731.1 104 -NSRNVGVKKTLVFYLGRAPNGERTDWVMHEYSL 136 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MGLCDEGDWP PGFRFHPTDE ELVVYYLKFK ICGRKLKLDI IRETDVYKWE PEELPGQSKL 60 KTGDRQWFFF SPREHRYPNA SRLSRATRHG YWKATGKDRI IQCNSRNVGV KKTLVFYLGR 120 APNGERTDWV MHEYSLEEDE LKRCKNVKDY YALYKLYKKS GPGPKNGEQY GAPFKEEDWV 180 DDADGQEPQV KILDEVNSVV REIENGRIQL SSDDIEELMQ QVVNDPVPVL PSISGYHQFD 240 SVLQVDDKED TVSTMIDAYS RDHVLPEADK VHDFSGHPSD LHASFDFTQL GNSQLQSFES 300 EISSAPKYCE EEDFLEINDL LGPEPTPVAN VDPLGNVSPT ELDGLSELDL FHDANMFLRD 360 LGPIVPETAL DPYLNALDID VTNTLNDHLD YGMDNGFWKN NETENAFSFP ESHGQFVTQS 420 TLGVGYESVS SAAAEGTAGT TMENQTATNA GGGSASWFSS NLWAFVESIP TTPASASENV 480 NRAFERMSSF SRLKLNTLNT LNNANVAVGN PVTGARRTGM NKGFLLFSII GVLCAILWVL 540 IGNVRLWGNC IAS

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MGLCDEGDWP PGFRFHPTDE ELVVYYLKFK ICGRKLKLDI IRETDVYKWE PEELPGQSKL  60
KTGDRQWFFF SPREHRYPNA SRLSRATRHG YWKATGKDRI IQCNSRNVGV KKTLVFYLGR  120
APNGERTDWV MHEYSLEEDE LKRCKNVKDY YALYKLYKKS GPGPKNGEQY GAPFKEEDWV  180
DDADGQEPQV KILDEVNSVV REIENGRIQL SSDDIEELMQ QVVNDPVPVL PSISGYHQFD  240
SVLQVDDKED TVSTMIDAYS RDHVLPEADK VHDFSGHPSD LHASFDFTQL GNSQLQSFES  300
EISSAPKYCE EEDFLEINDL LGPEPTPVAN VDPLGNVSPT ELDGLSELDL FHDANMFLRD  360
LGPIVPETAL DPYLNALDID VTNTLNDHLD YGMDNGFWKN NETENAFSFP ESHGQFVTQS  420
TLGVGYESVS SAAAEGTAGT TMENQTATNA GGGSASWFSS NLWAFVESIP TTPASASENV  480
NRAFERMSSF SRLKLNTLNT LNNANVAVGN PVTGARRTGM NKGFLLFSII GVLCAILWVL  540
IGNVRLWGNC IAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-125	NAC family protein