PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022938088.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 338aa    MW: 37702 Da    PI: 7.6954
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022938088.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.53e-30197250458
       CBFB_NFYA   4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +YVNaKQy++I++RR++Rakle+++k+ +++rkpylheSRh+hA++R RgsgGrF
  XP_022938088.1 197 IYVNAKQYHGIIRRRKSRAKLEAQNKV-IRNRKPYLHESRHRHAVNRVRGSGGRF 250
                     9**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MMAIPRENFA QKNLDQNSVH LLFPYTVDSM PWRNSNEQKI QMALSDNITL KNETPLQPHH  60
EQSGLRLRDQ ESSTAYSMGQ SLHKVRAMEV QNAQEQCISS ESGLDENYGE SVENQMKPVI  120
LFSNPEYMFN PPQVDSSHLM ARVPYPYPYV DPSYGGLFCS AYGQMASNTE AQVNSNVVGS  180
TPARVPLPHG LAEDGLIYVN AKQYHGIIRR RKSRAKLEAQ NKVIRNRKPY LHESRHRHAV  240
NRVRGSGGRF LSAKKDQPPD HITPPPTDWC QQKDTPDFNT CSSETGDHGT MTATCSETTS  300
ISSGSVMFGR TWSDSRFSAV SSSGGFVHDG ARNHASVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-35NF-YA family protein