PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022938084.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 344aa    MW: 38397.7 Da    PI: 7.2415
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022938084.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.53e-30203256458
       CBFB_NFYA   4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +YVNaKQy++I++RR++Rakle+++k+ +++rkpylheSRh+hA++R RgsgGrF
  XP_022938084.1 203 IYVNAKQYHGIIRRRKSRAKLEAQNKV-IRNRKPYLHESRHRHAVNRVRGSGGRF 256
                     9**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MMAIPRENFA QKNLDQNSVH LLFPYTVDSM PWRNSNEQKI QMALSDNITL KNETPLQPHH  60
EQSGLRLRDQ ESSTAYSMGQ SLHKVRAMEV QNAQEQCISS ESGLDENYGE SVENQMKPVI  120
LFSNPEYMFN PPQVDSSHLM ARVPYPYPYV DPSYGGLFCS AYGQMASNLH DSDQTEAQVN  180
SNVVGSTPAR VPLPHGLAED GLIYVNAKQY HGIIRRRKSR AKLEAQNKVI RNRKPYLHES  240
RHRHAVNRVR GSGGRFLSAK KDQPPDHITP PPTDWCQQKD TPDFNTCSSE TGDHGTMTAT  300
CSETTSISSG SVMFGRTWSD SRFSAVSSSG GFVHDGARNH ASVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.14e-34NF-YA family protein