PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022937383.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 253aa MW: 27023 Da PI: 8.1616 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.7 | 0.00018 | 91 | 113 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k Fs+ L H +H XP_022937383.1 91 YKCSVCNKAFSSYQALGGHKASH 113 9***********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MALEALNSPT TPSPALHYDD PSPNSIESWS KRKRTKRPRG FDNPPTEEEY LALCLIMLAR 60 GGATPTADPD HRLEYEVPIP AQPISVVKLS YKCSVCNKAF SSYQALGGHK ASHRKSATGE 120 DHSTSSTTTT TTTSATATAT ASVGGGKSHE CSICHKSFPT GQALGGHKRC HYDGGINNTT 180 TTNNNNATVT SSEGVGSTHT KSHSHRNFDL NLPALPELSP GFFISAGDDE VQSPLPLKKP 240 RVLTIPKIEI SQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 3e-61 | C2H2 family protein |