PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937360.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 507aa MW: 54583.6 Da PI: 9.7072

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937360.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.5e-08	205	249	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l av+++G g+W+ I + g Rt+ q+ rw XP_022937360.1 205 RKPWSKTEDLELMAAVEKYGEGNWANILKadFKG-DRTASQLSQRW 249 789************************7621455.89999988888 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MIEMKEKQKK GTISNEDSSA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN 60 VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI 120 ANGIPSESDV PSSSVVEAPL TIGISSNSRS FRASLENPQS ACLMQGMYVT VPISIQRQPL 180 PTPSATEVFD VNGAAGSNAA SRKRRKPWSK TEDLELMAAV EKYGEGNWAN ILKADFKGDR 240 TASQLSQRWS IIRKRHGNLN VGANTTSTQI SKAQIDAAHR ALSLALDLPV NNSKSAANSN 300 MNSSTVSSTS GAEAPVQIQN QSPQVLVPSR PLQVKPLPSA AKSGINTAKN TLMMKSTHNS 360 DSIVRATAVA AGARIVSPSD AASLMKAAQT KNAIHIKSKC VSSIQPPMLG NASTHLDARP 420 SVHYISTGRT ATPGANYVGG KSTMAGNNSM KYVSPKAPYN CSTAVLTNPP SNQISPTTES 480 PLKQEVKSSE EGKISKPIIT PKGDFRE

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MIEMKEKQKK GTISNEDSSA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN  60
VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI  120
ANGIPSESDV PSSSVVEAPL TIGISSNSRS FRASLENPQS ACLMQGMYVT VPISIQRQPL  180
PTPSATEVFD VNGAAGSNAA SRKRRKPWSK TEDLELMAAV EKYGEGNWAN ILKADFKGDR  240
TASQLSQRWS IIRKRHGNLN VGANTTSTQI SKAQIDAAHR ALSLALDLPV NNSKSAANSN  300
MNSSTVSSTS GAEAPVQIQN QSPQVLVPSR PLQVKPLPSA AKSGINTAKN TLMMKSTHNS  360
DSIVRATAVA AGARIVSPSD AASLMKAAQT KNAIHIKSKC VSSIQPPMLG NASTHLDARP  420
SVHYISTGRT ATPGANYVGG KSTMAGNNSM KYVSPKAPYN CSTAVLTNPP SNQISPTTES  480
PLKQEVKSSE EGKISKPIIT PKGDFRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	4e-67	MYB_related family protein