PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022936985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 222aa MW: 26949.3 Da PI: 8.6067 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.1 | 4.6e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W ++Ed +l v+++G + W++Ia+ g+ R++k+c+ rw++yl XP_022936985.1 14 RGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49 | 1.4e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r+r eE+e++++++k++G++ W++Iar ++ gRt++++k++w+++l XP_022936985.1 67 RDRINSEEEEIILKLHKKWGNK-WSRIARWLP-GRTDNEIKNYWRSHL 112 567789****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MATHSALQTE IQRRGPWLEQ EDRQLTMFVT RMGERKWDSI AKASGLERSG KSCRFRWLNY 60 LRPSLKRDRI NSEEEEIILK LHKKWGNKWS RIARWLPGRT DNEIKNYWRS HLRKKFPIQL 120 EDCKVKHGKP EKLSLRHDQN ERDVPLYNHF ELSNLEITSS PYETRLSNWI SNPLMNEKQE 180 VNHHEECNNS EFCFYYPNMN YARRDDQSDH FWDSLTPLWD IE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 9e-46 | MYB family protein |