PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936656.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 243aa    MW: 27207.5 Da    PI: 9.8677
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936656.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.0003292114123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_022936656.1  92 FSCNYCQRKFFSSQALGGHQNAH 114
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MSTFNVLPTS NPIHYPFILK LPSFFFFFFT NKKQKKKTNL PMEPLTDRNP LSGDGEEDDE  60
REPAELSDDR SSLLDLQLSS NSSDATTKPR VFSCNYCQRK FFSSQALGGH QNAHKRERTL  120
AKRVQRFDWG AAIPLHGGAF DRRSLGIHAH SQQIQKPVGF FSGPGPTSQL WPRPLFMGQQ  180
PAVGRLTPEL GGRNFGRFDD VAGWPAIGSS NAGNERSNNV SIVHSQTKQD QDQTNFLDLS  240
LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.14e-31C2H2 family protein