PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022935801.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 32759.9 Da PI: 7.9858 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl XP_022935801.1 14 KGPWSPDEDAKLKSYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.1 | 3.7e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T++Ed ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022935801.1 69 GDFTEDEDRIICSLYVNIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MGRAPCCDKA NVKKGPWSPD EDAKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGD FTEDEDRIIC SLYVNIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKRLYGK 120 HHEKQQQPVR RGRKIKSEIG NSMDIVFDNH VIYDNNNNNN QSPFLPELTP ALNSPPPPPP 180 YANYQPLQFP STPRQLSGVD LSKTDDVQFG MDGGSCLPVT SCQVGELEKV VYSNTASFED 240 GLQFSYDNNG LMNDLDWGEM SCLISAPLYS SMAHDSMIGS SYLEQQKQKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 3e-79 | MYB family protein |