PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935400.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 759aa MW: 84184.3 Da PI: 7.2668

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935400.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.6	6e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_022935400.1 52 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MQTDSIVSSN SETHHHSETF VAHVGDQGIA ASTPDHVIEP PPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHRLLKDRK KNVRKRPLQG ENCLPPIANG 180 VSNQSRALGH DGLAVKLVLV DTQNIPKLGP RKTVSKRNLN VGINRGNNGG YPTVLKPSRQ 240 RRKSEGGVSS AAYKKWEKAA IAGVSLVADA AEHLERTVTD KNVLRDQNTL GKKNTDPAGS 300 PLLLLPSLQP NSLIDVASTK LKLQLFPVDD GTRRALELDK HNPHLELTLS TRKKISSVLE 360 HLSRKWGNSS AAHGELMLFP YSIQRKSLAD CQRWSQDSFE SAGDVYATIG RPQVFRLRYG 420 WCSNAEHGSI ELQTSVPAYC IQDDHVMDSR DIEGRIVDVA SIDAQPVNFN KNEVGTLSKN 480 MSTPTAPSET ERSISARPND DLPRSSNPAL NMSWDKKNVT DTTIIHRSED VDDLKSSNGT 540 SLSAGEWADS LTNISIGDLL SGVSQDVDAN CDVAPLAEGT QCLQQIPFSC DSFDAAIAAH 600 VSRQQNKAVS HPTLLSHASS IFDAEETCDA FSFQKNPVIL HDVSSSFTFS SVRACEHIAR 660 TNSMGSSHMT EDLPRSESPS EDHIQGDPKD ECQANPQISE TNNIDELADI YWTNKYHNEE 720 LILGDSLSSL NRLIASSLDA FQSCSFFGFD KKEPSAFNS

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MQTDSIVSSN SETHHHSETF VAHVGDQGIA ASTPDHVIEP PPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHRLLKDRK KNVRKRPLQG ENCLPPIANG  180
VSNQSRALGH DGLAVKLVLV DTQNIPKLGP RKTVSKRNLN VGINRGNNGG YPTVLKPSRQ  240
RRKSEGGVSS AAYKKWEKAA IAGVSLVADA AEHLERTVTD KNVLRDQNTL GKKNTDPAGS  300
PLLLLPSLQP NSLIDVASTK LKLQLFPVDD GTRRALELDK HNPHLELTLS TRKKISSVLE  360
HLSRKWGNSS AAHGELMLFP YSIQRKSLAD CQRWSQDSFE SAGDVYATIG RPQVFRLRYG  420
WCSNAEHGSI ELQTSVPAYC IQDDHVMDSR DIEGRIVDVA SIDAQPVNFN KNEVGTLSKN  480
MSTPTAPSET ERSISARPND DLPRSSNPAL NMSWDKKNVT DTTIIHRSED VDDLKSSNGT  540
SLSAGEWADS LTNISIGDLL SGVSQDVDAN CDVAPLAEGT QCLQQIPFSC DSFDAAIAAH  600
VSRQQNKAVS HPTLLSHASS IFDAEETCDA FSFQKNPVIL HDVSSSFTFS SVRACEHIAR  660
TNSMGSSHMT EDLPRSESPS EDHIQGDPKD ECQANPQISE TNNIDELADI YWTNKYHNEE  720
LILGDSLSSL NRLIASSLDA FQSCSFFGFD KKEPSAFNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein