PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935397.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 788aa MW: 87692.7 Da PI: 7.824

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935397.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.3e-08	48	90	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_022935397.1 48 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 90 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 788 aa Download sequence
MLRSIIRKSM KDKKTFVAHV GDQGIAASTP DHVIEPPPAK RPTRQWAAWT REEEESFFTA 60 LRQVGKNFEK ITCHVQSKNK DQVRHYYYRL VRRMNKLLAP GLCLDAKNSK DTNAAMLRWW 120 SLLEKYSCKA SKLHLKPRRF KIFVEALEHR LLKDRKKNVR KRPLQGENCL PPIANGVSNQ 180 SRALGHDGLA VKLVLVDTQN IPKLGPRKTV SKRNLNVGIN RGNNGGYPTV LKPSRQRRKS 240 EGGVSSAAYK KWEKAAIAGV SLVADAAEHL ERTVTDKNVL RDQNTLGKKN TDPAGSPLLL 300 LPSLQPNSLI DVASTKLKLQ LFPVDDGTRR ALELDKHNPH LELTLSTRKK ISSVLEHLSR 360 KWGNSSAAHG ELMLFPYSIQ RKSLADCQRW SQDSFESAGD VYATIGRPQV FRLRYGWCSN 420 AEHGSIELQT SVPAYCIQDD HVMDSRDIEG RIVDVASIDA QPVNFNKNEV GTLSKNMSTP 480 TAPSETERSI SARPNDDLPR SSNPALNMSW DKKNVTDTTI IHRSEDVDDL KSSNGTSLSA 540 GEWADSLTNI SIGDLLSGVS QDVDANCDVA PLAEGTQCLQ QIPFSCDSFD AAIAAHVSRQ 600 QNKAVSHPTL LSHASSIFDA EETCDAFSFQ KNPVILHDVS SSFTFSSVRA CEHIARTNSM 660 GSSHMTEDLP RSESPSEDHI QGDPKDECQA NPQISETNNI DELADIYWVC SFMFEKSKDN 720 LCFVFYSQPD SLGPLDLDFP QTNKYHNEEL ILGDSLSSLN RLIASSLDAF QSCSFFGFDK 780 KEPSAFNS

Sequence ? help Back to Top

Protein Sequence Length: 788 aa Download sequence

MLRSIIRKSM KDKKTFVAHV GDQGIAASTP DHVIEPPPAK RPTRQWAAWT REEEESFFTA  60
LRQVGKNFEK ITCHVQSKNK DQVRHYYYRL VRRMNKLLAP GLCLDAKNSK DTNAAMLRWW  120
SLLEKYSCKA SKLHLKPRRF KIFVEALEHR LLKDRKKNVR KRPLQGENCL PPIANGVSNQ  180
SRALGHDGLA VKLVLVDTQN IPKLGPRKTV SKRNLNVGIN RGNNGGYPTV LKPSRQRRKS  240
EGGVSSAAYK KWEKAAIAGV SLVADAAEHL ERTVTDKNVL RDQNTLGKKN TDPAGSPLLL  300
LPSLQPNSLI DVASTKLKLQ LFPVDDGTRR ALELDKHNPH LELTLSTRKK ISSVLEHLSR  360
KWGNSSAAHG ELMLFPYSIQ RKSLADCQRW SQDSFESAGD VYATIGRPQV FRLRYGWCSN  420
AEHGSIELQT SVPAYCIQDD HVMDSRDIEG RIVDVASIDA QPVNFNKNEV GTLSKNMSTP  480
TAPSETERSI SARPNDDLPR SSNPALNMSW DKKNVTDTTI IHRSEDVDDL KSSNGTSLSA  540
GEWADSLTNI SIGDLLSGVS QDVDANCDVA PLAEGTQCLQ QIPFSCDSFD AAIAAHVSRQ  600
QNKAVSHPTL LSHASSIFDA EETCDAFSFQ KNPVILHDVS SSFTFSSVRA CEHIARTNSM  660
GSSHMTEDLP RSESPSEDHI QGDPKDECQA NPQISETNNI DELADIYWVC SFMFEKSKDN  720
LCFVFYSQPD SLGPLDLDFP QTNKYHNEEL ILGDSLSSLN RLIASSLDAF QSCSFFGFDK  780
KEPSAFNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein