PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022935237.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 230aa MW: 25982.6 Da PI: 9.4971 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 94.3 | 1.9e-29 | 18 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp+G+rF Ptdeelv +yLk+kv g +l++ +vi+e++++ ++Pw Lp + +++ +fFsk+++ r + g+Wk+ gk+k ++++ XP_022935237.1 18 LPVGYRFCPTDEELVEHYLKRKVFGLPLPA-SVIPEFNVFLTDPWGLPGDL---KEKRFFFSKQKSFL----RM--NAGCGIWKSIGKEKFIITQ 102 799***************************.99***************544...45679998876654....33..4578***********9998 PP NAM 96 .kgelvglkktLvfykgrapk.gektdWvmheyrl 128 ++l gl+k+Lvf + + p+ ++ t+Wvmheyrl XP_022935237.1 103 aINQLFGLRKSLVFSESKFPErTRTTRWVMHEYRL 137 66778**********887665156789******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MFPMENTSNF VFDGGIRLPV GYRFCPTDEE LVEHYLKRKV FGLPLPASVI PEFNVFLTDP 60 WGLPGDLKEK RFFFSKQKSF LRMNAGCGIW KSIGKEKFII TQAINQLFGL RKSLVFSESK 120 FPERTRTTRW VMHEYRLARS AATSNSTQQI EVGDWAVYCL FQKRRKHKRK GVKENQRVAA 180 AQGSILDLTV EDGWEFPQPC ASCSSGVTQV SSNGTGSTDQ EETSGGLGFS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 164 | 170 | RRKHKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 7e-42 | NAC family protein |