PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934721.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 374aa MW: 41240.8 Da PI: 7.7605

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934721.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	188	241	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022934721.1 188 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 241 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.8e-15	189	240	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022934721.1 189 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 240 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS SIRTLSHGFA QTSFDLLIQR 60 NDPRAHTELS LGTNNNNNNN SLSGVPLNNP TPPPRLRGLS MFDISSDGLQ PIKGIPVYHN 120 RPFSFLGVDQ KDHYFHHQFP SSCFFPNYSN SNGVVQMGYH HHRGIGGNNS SPRFNNGKLP 180 AKRSMRAPRM RWTTSLHARF VHAVEHLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR 240 TVKTTDKPAA SSGQSDGSGE DEVSPTLGTI SGGHGPKQFS DQRAPPDRSG QQSPDLEFGS 300 STLWSNSSRD VWAETNGNEM DVIRPSLYAK MQQKCMHQIQ ECDSGAMKKY NSECCNKPSL 360 EFRLGRAEWD VEEH

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS SIRTLSHGFA QTSFDLLIQR  60
NDPRAHTELS LGTNNNNNNN SLSGVPLNNP TPPPRLRGLS MFDISSDGLQ PIKGIPVYHN  120
RPFSFLGVDQ KDHYFHHQFP SSCFFPNYSN SNGVVQMGYH HHRGIGGNNS SPRFNNGKLP  180
AKRSMRAPRM RWTTSLHARF VHAVEHLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR  240
TVKTTDKPAA SSGQSDGSGE DEVSPTLGTI SGGHGPKQFS DQRAPPDRSG QQSPDLEFGS  300
STLWSNSSRD VWAETNGNEM DVIRPSLYAK MQQKCMHQIQ ECDSGAMKKY NSECCNKPSL  360
EFRLGRAEWD VEEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-51	G2-like family protein